Table of Contents


Fundamentals of Biochemistry

Biochem 380 - Fall 2006

Lecture 006


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Questions



Section 2.8: The pH Scale


Reciprocal Relation of [H+] and [OH-]

  • A change in 1 pH unit corresponds to a ten-fold change in concentration

  • Give a value of one, the other can be found by dividing the ion product Kw:

  • [OH-] = 1 x 10-14 / [H+]

  • [H+] = 1 x 10-14 / [OH-]

pH Values for Various Fluids

  • pH values less than 7 are acidic

  • pH values greater than 7 are basic

  • A pH value of 7 is neutral

  • pH of normal human blood is 7.4

  • Diabetics can have lower pH (acidosis)

  • Prolonged vomiting or hyperventilation can produce a higher pH (alkalosis)

pH of Strong Acid Solutions

  • If an acid such as hydrochloric acid (HCl) is added to water, the H+ and the Cl- dissociate (almost) completely from each other

  • When this complete dissociation occurs, the acid is said to be a strong acid

  • One consequence of this is that the amount of a strong acid directly determines the resulting [H+] and pH

  • For example, in a solution of 0.01 M HCl, there will be 0.01 M [H+]

  • This is 1 x 10-2 M [H+], so the pH of the solution is 2

pH of Strong Base Solutions


  • Similarly, for a strong base such as sodium hydroxide (NaOH), the Na+ and OH- ions will dissociate completely from each other in water

  • A 0.01 M solution of NaOH will have an OH- concentration of 1 x 10-2

  • What is the pH?

  • [H+] = 1 x 10-14 / 1 x 10-2 = 1 x 10-12

  • The pH will be 12

Section 2.9: Weak Acids and pKa

  • Many acids, such as the amino acids in proteins and acetic acid (the main ingredient in vinegar), do not dissociate completely in water

  • Such acids are called weak acids, and similarly, bases that do not completely dissociate are called weak bases

  • Ka, the acid dissociation constant, is the equilibrium constant for the reaction of a weak acid HA converting into a proton and the conjugate base, A-:

pKa


  • As with pH, the logarithmic scale is useful for working with Ka values that can vary over many orders of magnitude

  • In analogy with the definition of pH, the parameter pKa is defined as:


  • Unlike pH (which represents a concentration), pKa represents an intrinsic property of acids

  • This property is the tendency to dissociate into [H+] and the conjugate base [A-]

pKa Values of Some Common Weak Acids


The Henderson-Hasselbalch Equation

  • If we create a solution of a weak acid, it is possible to find a simple relation between the amount and pKa of the acid and the resulting pH of the solution

  • We start with the equation that defines the acid dissociation constant Ka:

  • Taking the log of both sides, we get:

  • Swapping sides for the Ka and H+ terms gives:

The Henderson-Hasselbalch Equation


  • This gives the pH in terms of the pKa of the acid and the log of the ratio of [A-] to [HA]:


  • This useful relation is called the Henderson-Hasselbalch equation

  • It is important to note that the concentrations in the equation are the final values of [HA] and [A-], after they have come to equilibrium

  • Unlike the situation with strong acids, the final amount of the conjugate base of a dissociated weak acid will generally be different from the initial amount that is added to the solution

  • Consequently, the calculations for determining weak acid concentrations are a little more complicated, as we will see in an example

Titration of a Weak Acid

  • The pKa values of weak acids are determined by titration. This involves adding small increments of a known amount of a strong base to the solution and measuring the resulting changes in pH

  • For example, titration of acetic acid gives the curve shown above. Note that the pKa value is determined by an inflection point (minimum slope) at the midpoint of the curve

  • At this point, there are equal concentrations of HA and A-. Here, as given by the Henderson-Hasselbalch equation, the pH will be equal to the pKa

Use of the HH Equation



  • When the pH of a solution is previously established, such as the acidic environment of the stomach, the Henderson-Hasselbalch (HH) equation is useful for determining how much of a weak acid will dissociate in a given environment

  • For example, if the pH is > than the pKa of a weak acid, which species will predominate, [A-] or [HA]?

    • In this case, pH - pKa will be positive, so there must be more A- than HA (more deprotonated)

  • Which predominates if the pH is < than the pKa?

    • Here, pH - pKa will be negative, so there must be more HA than A- (more protonated)

Some Useful Math for pH Calculations


  • If y = log x, then x = 10y

  • log( x * y) = log( x ) + log( y )

  • log( x / y) = log( x ) - log( y )

  • -log( x ) = log( 1 / x )

  • log( 1 ) = 0

A Sample Calculation with HH

  • What is the pH of a solution of 0.1M acetic acid?

  • The Ka is 1.76 x 10-5M

  • We don't know the final concentration of [H+], so call it x

  • The equation for the dissociation constant Ka gives:

  • 1.76 x 10-5 = [H+][CH3COO-] / [CH3COOH] = x2 / (0.1 - x)

  • This is a quadratic equation with a = 1, b = 1.76 x 10-5, and c = -1.76 x 10-6, giving x = 0.00132 (and a negative root, which we throw out)

  • The pH is then -log(0.00132) = 2.9

  • Note that if we assume that [HA] remains constant (usually valid for weak bases), we get a simpler equation to solve: 1.76 x 10-5 = x2 / 0.1, x = 1.33 x 10-3, pH = 2.9

Polyprotic Acids

  • Titration of polyprotic acids (acids with multiple proton-donating groups) usually give a curve with multiple inflection points, with one inflection point for each donating group:

Section 2.10: Buffers


  • Because a weak acid (or base) can exist in equilibrium with its conjugate, the equilibrium can be maintained even when small amounts of [H+] or [OH-] are added to it

  • For example, consider a solution with equal amounts of a weak acid [HA] and conjugate base [A-]

  • If a small amount of [H+] is added, then as long as there is some [A-] available in the solution, the [H+] can combine with it to produce [HA], maintaining the [H+] level

  • If a small amount of [OH-] is added, then as long as there is [HA] available in the solution, it can dissociate to [H+] and [A-], providing some [H+] to combine with the [OH-], again acting to maintain the existing [H+] level

  • A solution with this kind of ability to resist changes in pH is called a buffer

Physiological Buffering


  • An example of a buffering system in living organisms is found in the blood plasma of mammals

  • The buffering capacity of the blood is demonstrated by a comparison with saline and water

  • When 1 mL of 10 M HCL is added to saline or water, the pH is lowered from 7.0 to 2.0. By contrast, the same amount of acid added to blood plasma produces a much smaller change in pH, from 7.4 to 7.2

  • The means for regulating the pH in the blood is through the carbon dioxide - carbonic acid - bicarbonate buffer system

The Blood Buffering System

  • This system controls pH through the ratio of bicarbonate (HCO3-) to pCO2 in the lungs

  • When the pH in the blood decreases, pCO2 increases, lowering the [H+] in the blood and restoring the pH level

  • If the pH of the blood rises, CO2 dissolves back into the blood, shifting the equlibrium in the opposite direction

Questions


Next Lecture: Sections 3.1 - 3.2


  • Read Sections 3.1 - 3.2